|
| [23] | A. Babbar, T. C. A. Hitch, O. Pabst, T. Clavel, J. Hübel, S. Eswaran, N. Wagner, A. Schippers,
"The Compromised Mucosal Immune System of β7 Integrin-Deficient Mice Has Only Minor Effects on the Fecal Microbiota in Homeostasis", Frontiers in microbiology, vol. 10, 2019, pp. 2284.
|
|
| [22] | J. Kabbert, J. Benckert, T. Rollenske, T. C. A. Hitch, T. Clavel, V. Cerovic, H. Wardemann, O. Pabst,
"High microbiota reactivity of adult human intestinal IgA requires somatic mutations", Journal of experimental medicine, vol. 217, no. 11, 2020, pp. e20200275.
|
| [21] | T. R. Lesker, A. C. Durairaj, E. J. C. Gálvez, I. Lagkouvardos, J. F. Baines, T. Clavel, A. Sczyrba, A. C. McHardy, T. Strowig,
"An Integrated Metagenome Catalog Reveals New Insights into the Murine Gut Microbiome", Cell reports, vol. 30, no. 9, 2020, pp. 2909–2922.e6.
|
| [20] | A. Mendler, A. Pierzchalski, M. Bauer, S. Röder, A. Sattler, M. Standl, M. Borte, M. von Bergen, U. Rolle-Kampczyk, G. Herberth,
"MAIT cell activation in adolescents is impacted by bile acid concentrations and body weight", Clinical and experimental immunology, vol. 200, no. 2, 2020, pp. 199–213.
|
| [19] | F. C. Pereira, K. Wasmund, I. Cobankovic, N. Jehmlich, C. W. Herbold, K. S. Lee, B. Sziranyi, C. Vesely, T. Decker, R. Stocker, B. Warth, M. von Bergen, M. Wagner, D. Berry,
"Rational design of a microbial consortium of mucosal sugar utilizers reduces Clostridiodes difficile colonization", Nature Communications, vol. 11, 2020, pp. 5104.
|
| [18] | A. Riba, K. Hassani, A. Walker, N. van Best, D. von Zeschwitz, T. Anslinger, N. Sillner, S. Rosenhain, D. Eibach, O. Maiga-Ascofaré, U. Rolle-Kampczyk, M. Basic, A. Binz, S. Mocek, B. Sodeik, R. Bauerfeind, A. Mohs, C. Trautwein, F. Kießling, J. May, M. Klingenspor, F. Gremse, P. Schmitt-Kopplin, A. Bleich, N. Torow, M. von Bergen, M. W. Hornef,
"Disturbed gut microbiota and bile homeostasis in Giardia-infected mice contributes to metabolic dysregulation and growth impairment", Science translational medicine, vol. 12, no. 565, 2020, pp. eaay7019.
|
| [17] | N. van Best, U. Rolle-Kampczyk, F. G. Schaap, M. Basic, S. W. M. Olde Damink, A. Bleich, P. Savelkoul, M. von Bergen, J. Penders, M. W. Hornef,
"Bile acids drive the newborn’s gut microbiota maturation", Nature Communications, vol. 11, 2020, pp. 3692.
|
|
| [16] | S. Eswaran, A. Babbar, H. K. Drescher, T. C. A. Hitch, T. Clavel, M. Muschaweck, T. Ritz, D. C. Kroy, C. Trautwein, N. Wagner, A. Schippers,
"Upregulation of anti-oxidative stress response improves metabolic changes in l-selectin-deficient mice but does not prevent NAFLD progression or fecal microbiota shifts", International journal of molecular sciences, vol. 22, no. 14, 2021, pp. 7314.
|
| [15] | T. C. A. Hitch, T. Riedel, A. Oren, J. Overmann, T. D. Lawley, T. Clavel,
"Automated analysis of genomic sequences facilitates high-throughput and comprehensive description of bacteria", ISME communications, vol. 1, 2021, pp. 16.
|
| [14] | N. Kumar, T. C. A. Hitch, D. Haller, I. Lagkouvardos, T. Clavel,
"MiMiC: a bioinformatic approach for generation of synthetic communities from metagenomes", Microbial biotechnology, vol. 14, no. 4, 2021, pp. 1757–1770.
|
| [13] | S. Reitmeier, T. C. A. Hitch, N. Treichel, N. Fikas, B. Hausmann, A. E. Ramer-Tait, K. Neuhaus, D. Berry, D. Haller, I. Lagkouvardos, T. Clavel,
"Handling of spurious sequences affects the outcome of high-throughput 16S rRNA gene amplicon profiling", ISME communications, vol. 1, 2021, pp. 31.
|
| [12] | K. Schubert, I. Karkossa, J. Schor, B. Engelmann, L. M. Steinheuer, T. Bruns, U. Rolle-Kampczyk, J. Hackermüller, M. von Bergen,
"A Multi-Omics Analysis of Mucosal-Associated-Invariant T Cells Reveals Key Drivers of Distinct Modes of Activation", Frontiers in immunology, vol. 12, 2021, pp. 616967.
|
| [11] | T. Streidl, I. Karkossa, R. R. Segura Muñoz, C. Eberl, A. Zaufel, J. Plagge, R. Schmaltz, K. Schubert, M. Basic, K. M. Schneider, M. Afify, C. Trautwein, R. H. Tolba, B. Stecher, H. L. Doden, J. M. Ridlon, J. Ecker, T. Moustafa, M. von Bergen, A. E. Ramer-Tait, T. Clavel,
"The gut bacterium Extibacter muris produces secondary bile acids and influences liver physiology in gnotobiotic mice", Gut microbes, vol. 13, no. 1, 2021, pp. 1–21.
|
|
| [10] | A. Afrizal, S. A. V. Jennings, T. C. A. Hitch, T. Riedel, M. Basic, A. Panyot, N. Treichel, F. T. Hager, E. O. Wong, B. Wolter, A. Viehof, A. von Strempel, C. Eberl, E. M. Buhl, B. Abt, A. Bleich, R. H. Tolba, L. M. Blank, W. W. Navarre, F. Kießling, H. Horz, N. Torow, V. Cerovic, B. Stecher, T. Strowig, J. Overmann, T. Clavel,
"Enhanced cultured diversity of the mouse gut microbiota enables custom-made synthetic communities", Cell host and microbe, vol. 30, no. 11, 2022, pp. 1630–1645.e25.
|
| [9] | S. Bellais, M. Nehlich, M. Ania, A. Duquenoy, W. Mazier, G. van den Engh, J. Baijer, N. Treichel, T. Clavel, I. Belotserkovsky, V. Thomas,
"Species-targeted sorting and cultivation of commensal bacteria from the gut microbiome using flow cytometry under anaerobic conditions", Microbiome, vol. 10, no. 1, 2022, pp. 24.
|
| [8] | T. Clavel, H. Horz, N. Segata, M. J. G. T. Vehreschild,
"Next steps after 15 stimulating years of human gut microbiome research", Microbial biotechnology, vol. 15, no. 1, 2022, pp. 164–175.
|
| [7] | C. M. Fries, S. Haange, U. Rolle-Kampczyk, A. Till, M. Lammert, L. Grasser, E. Medawar, A. Dietrich, A. Horstmann, M. von Bergen, W. K. Fenske,
"Metabolic Profile and Metabolite Analyses in Extreme Weight Responders to Gastric Bypass Surgery", Metabolites, vol. 12, no. 5, 2022, pp. 417.
|
| [6] | S. Haange, A. Till, P. Bergh, G. Fauler, M. Gigl, A. Löfgren-Sandblom, F. G. Schaap, T. Clavel, C. Trautwein, W. Fenske, K. Kleigrewe, H. Marschall, S. W. M. Olde Damink, T. Moustafa, M. von Bergen, U. Rolle-Kampczyk,
"Ring Trial on Quantitative Assessment of Bile Acids Reveals a Method- and Analyte-Specific Accuracy and Reproducibility", Metabolites, vol. 12, no. 7, 2022, pp. 583.
|
| [5] | T. C. A. Hitch, L. J. Hall, S. K. Walsh, G. E. Leventhal, E. Slack, T. de Wouters, J. Walter, T. Clavel,
"Microbiome-based interventions to modulate gut ecology and the immune system", Mucosal immunology, vol. 15, 2022, pp. 1095–1113.
|
| [4] | S. Murthy, I. Karkossa, C. Schmidt, A. Hoffmann, T. Hagemann, K. Rothe, O. Seifert, U. Anderegg, M. von Bergen, K. Schubert, M. Rossol,
"Danger signal extracellular calcium initiates differentiation of monocytes into SPP1/osteopontin-producing macrophages", Cell death & disease, vol. 13, no. 1, 2022, pp. 53.
|
| [3] | K. J. Pedersen, S. Haange, K. Žížalová, A. Viehof, T. Clavel, M. Leniček, B. Engelmann, L. Y. Wick, F. G. Schaap, N. Jehmlich, U. Rolle-Kampczyk, M. von Bergen,
"Eggerthella lenta DSM 2243 Alleviates Bile Acid Stress Response in Clostridium ramosum and Anaerostipes caccae by Transformation of Bile Acids", Microorganisms, vol. 10, no. 10, 2022, pp. 2025.
|
|
| [2] | B. Gurbuz, N. Guldiken, P. Reuken, L. Fu, K. Remih, C. Preisinger, R. Brůha, M. Leníček, J. Petrtýl, J. Reißing, M. Aly, M. Fromme, B. Zhou, I. Karkossa, K. Schubert, M. von Bergen, A. Stallmach, T. Bruns, P. Strnad,
"Biomarkers of hepatocellular synthesis in patients with decompensated cirrhosis", Hepatology international, vol. 17, no. 3, 2023, pp. 698–708.
|
| [1] | N. Torow, R. Li, T. C. A. Hitch, C. Mingels, S. Al Bounny, N. van Best, E. Stange, B. Simons, T. Maié, L. Rüttger, N. M. K. P. Gubbi, D. A. Abbott, A. Benabid, M. Gadermayr, S. Runge, N. Treichel, D. Merhof, S. P. Rosshart, N. Jehmlich, T. W. Hand, M. von Bergen, F. Heymann, O. Pabst, T. Clavel, F. Tacke, H. Lelouard, I. G. Costa, M. W. Hornef,
"M cell maturation and cDC activation determine the onset of adaptive immune priming in the neonatal Peyer’s patch", Immunity, 2023.
|