You see a filtered list - Keywords: CRC1382-Project A05

2023
[23]	Biomarkers of hepatocellular synthesis in patients with decompensated cirrhosis (Gurbuz, Berivan, Guldiken, Nurdan, Reuken, Philipp, Fu, Lei, Remih, Katharina, Preisinger, Christian, Brůha, Radan, Leníček, Martin, Petrtýl, Jaromír, Reißing, Johanna, Aly, Mahmoud, Fromme, Malin, Zhou, Biaohuan, Karkossa, Isabel, Schubert, Kristin, von Bergen, Martin, Stallmach, Andreas, Bruns, Tony and Strnad, Pavel), In Hepatology international, Springer, volume 17, 2023, SFB 1382: Die Darm-Leber-Achse – Funktionelle Zusammenhänge und therapeutische Strategien (403224013). [bibtex] [url] [doi]
[22]	M cell maturation and cDC activation determine the onset of adaptive immune priming in the neonatal Peyer’s patch (Torow, Natalia, Li, Ronghui, Hitch, Thomas Charles Adrian, Mingels, Clemens, Al Bounny, Shahed, van Best, Niels, Stange, Eva-Lena, Simons, Britta, Maié, Tiago, Rüttger, Lennart, Gubbi, Narasimha Murthy Keshava Prasad, Abbott, Darryl Adelaide, Benabid, Adam, Gadermayr, Michael, Runge, Solveig, Treichel, Nicole, Merhof, Dorit, Rosshart, Stephan Patrick, Jehmlich, Nico, Hand, Timothy Wesley, von Bergen, Martin, Heymann, Felix, Pabst, Oliver, Clavel, Thomas, Tacke, Frank, Lelouard, Hugues, Costa, Ivan G. and Hornef, Mathias W.), In Immunity, Elsevier, 2023, SFB 1382: Die Darm-Leber-Achse – Funktionelle Zusammenhänge und therapeutische Strategien (403224013). [bibtex] [url] [doi]
2022
[21]	Enhanced cultured diversity of the mouse gut microbiota enables custom-made synthetic communities (Afrizal, Afrizal, Jennings, Susan A. V., Hitch, Thomas C. A., Riedel, Thomas, Basic, Marijana, Panyot, Atscharah, Treichel, Nicole, Hager, Fabian Tobias, Wong, Erin Oi-Yan, Wolter, Birger, Viehof, Alina, von Strempel, Alexandra, Eberl, Claudia, Buhl, Eva Miriam, Abt, Birte, Bleich, André, Tolba, René H., Blank, Lars Mathias, Navarre, William W., Kießling, Fabian, Horz, Hans-Peter, Torow, Natalia, Cerovic, Vuk, Stecher, Bärbel, Strowig, Till, Overmann, Jörg and Clavel, Thomas), In Cell host and microbe, Elsevier, volume 30, 2022, SFB 1382: Die Darm-Leber-Achse – Funktionelle Zusammenhänge und therapeutische Strategien (403224013). [bibtex] [url] [doi]
[20]	Species-targeted sorting and cultivation of commensal bacteria from the gut microbiome using flow cytometry under anaerobic conditions (Bellais, Samuel, Nehlich, Mélanie, Ania, Maryne, Duquenoy, Aurore, Mazier, Wilfrid, van den Engh, Ger, Baijer, Jan, Treichel, Nicole, Clavel, Thomas, Belotserkovsky, Ilia and Thomas, Vincent), In Microbiome, Biomed Central, volume 10, 2022, SFB 1382: Die Darm-Leber-Achse – Funktionelle Zusammenhänge und therapeutische Strategien (403224013). [bibtex] [url] [doi]
[19]	Next steps after 15 stimulating years of human gut microbiome research (Clavel, Thomas, Horz, Hans-Peter, Segata, Nicola and Vehreschild, Maria J. G. T.), In Microbial biotechnology, Wiley-Blackwell, volume 15, 2022, SFB 1382: Die Darm-Leber-Achse – Funktionelle Zusammenhänge und therapeutische Strategien (403224013). [bibtex] [url] [doi]
[18]	Metabolic Profile and Metabolite Analyses in Extreme Weight Responders to Gastric Bypass Surgery (Fries, Charlotte M., Haange, Sven-Bastiaan, Rolle-Kampczyk, Ulrike, Till, Andreas, Lammert, Mathis, Grasser, Linda, Medawar, Evelyn, Dietrich, Arne, Horstmann, Annette, von Bergen, Martin and Fenske, Wiebke K.), In Metabolites, MDPI, volume 12, 2022, SFB 1382: Die Darm-Leber-Achse – Funktionelle Zusammenhänge und therapeutische Strategien (403224013). [bibtex] [url] [doi]
[17]	Ring Trial on Quantitative Assessment of Bile Acids Reveals a Method- and Analyte-Specific Accuracy and Reproducibility (Haange, Sven-Bastiaan, Till, Andreas, Bergh, Per-Olof, Fauler, Günter, Gigl, Michael, Löfgren-Sandblom, Anita, Schaap, Frank G., Clavel, Thomas, Trautwein, Christian, Fenske, Wiebke, Kleigrewe, Karin, Marschall, Hanns-Ulrich, Olde Damink, Steven W. M., Moustafa, Tarek, von Bergen, Martin and Rolle-Kampczyk, Ulrike), In Metabolites, MDPI, volume 12, 2022, SFB 1382: Die Darm-Leber-Achse – Funktionelle Zusammenhänge und therapeutische Strategien (403224013). [bibtex] [url] [doi]
[16]	Microbiome-based interventions to modulate gut ecology and the immune system (Hitch, Thomas C. A., Hall, Lindsay J., Walsh, Sarah Kate, Leventhal, Gabriel E., Slack, Emma, de Wouters, Tomas, Walter, Jens and Clavel, Thomas), In Mucosal immunology, Nature Publishing Group, volume 15, 2022, SFB 1382: Die Darm-Leber-Achse – Funktionelle Zusammenhänge und therapeutische Strategien (403224013). [bibtex] [url] [doi]
[15]	Danger signal extracellular calcium initiates differentiation of monocytes into SPP1/osteopontin-producing macrophages (Murthy, Supriya, Karkossa, Isabel, Schmidt, Caroline, Hoffmann, Anne, Hagemann, Tobias, Rothe, Kathrin, Seifert, Olga, Anderegg, Ulf, von Bergen, Martin, Schubert, Kristin and Rossol, Manuela), In Cell death & disease, Nature Publishing Group, volume 13, 2022, SFB 1382: Die Darm-Leber-Achse – Funktionelle Zusammenhänge und therapeutische Strategien (403224013). [bibtex] [url] [doi]
[14]	Eggerthella lenta DSM 2243 Alleviates Bile Acid Stress Response in Clostridium ramosum and Anaerostipes caccae by Transformation of Bile Acids (Pedersen, Kristian Jensen, Haange, Sven-Bastiaan, Žížalová, Kateřina, Viehof, Alina, Clavel, Thomas, Leniček, Martin, Engelmann, Beatrice, Wick, Lukas Y., Schaap, Frank G., Jehmlich, Nico, Rolle-Kampczyk, Ulrike and von Bergen, Martin), In Microorganisms, MDPI, volume 10, 2022, SFB 1382: Die Darm-Leber-Achse – Funktionelle Zusammenhänge und therapeutische Strategien (403224013). [bibtex] [url] [doi]
2021
[13]	Upregulation of anti-oxidative stress response improves metabolic changes in l-selectin-deficient mice but does not prevent NAFLD progression or fecal microbiota shifts (Eswaran, Sreepradha, Babbar, Anshu, Drescher, Hannah K., Hitch, Thomas C. A., Clavel, Thomas, Muschaweck, Moritz, Ritz, Thomas, Kroy, Daniela C., Trautwein, Christian, Wagner, Norbert and Schippers, Angela), In International journal of molecular sciences, Molecular Diversity Preservation International, volume 22, 2021, SFB 1382: Die Darm-Leber-Achse – Funktionelle Zusammenhänge und therapeutische Strategien (403224013). [bibtex] [url] [doi]
[12]	Automated analysis of genomic sequences facilitates high-throughput and comprehensive description of bacteria (Hitch, Thomas C. A., Riedel, Thomas, Oren, Aharon, Overmann, Jörg, Lawley, Trevor D. and Clavel, Thomas), In ISME communications, Springer Nature, volume 1, 2021, SFB 1382: Die Darm-Leber-Achse – Funktionelle Zusammenhänge und therapeutische Strategien (403224013). [bibtex] [url] [doi]
[11]	MiMiC: a bioinformatic approach for generation of synthetic communities from metagenomes (Kumar, Neeraj, Hitch, Thomas C. A., Haller, Dirk, Lagkouvardos, Ilias and Clavel, Thomas), In Microbial biotechnology, Wiley-Blackwell, volume 14, 2021, SFB 1382: Die Darm-Leber-Achse – Funktionelle Zusammenhänge und therapeutische Strategien (403224013). [bibtex] [url] [doi]
[10]	Handling of spurious sequences affects the outcome of high-throughput 16S rRNA gene amplicon profiling (Reitmeier, Sandra, Hitch, Thomas C. A., Treichel, Nicole, Fikas, Nikolaos, Hausmann, Bela, Ramer-Tait, Amanda E., Neuhaus, Klaus, Berry, David, Haller, Dirk, Lagkouvardos, Ilias and Clavel, Thomas), In ISME communications, Springer Nature, volume 1, 2021, SFB 1382: Die Darm-Leber-Achse – Funktionelle Zusammenhänge und therapeutische Strategien (403224013). [bibtex] [url] [doi]
[9]	A Multi-Omics Analysis of Mucosal-Associated-Invariant T Cells Reveals Key Drivers of Distinct Modes of Activation (Schubert, Kristin, Karkossa, Isabel, Schor, Jana, Engelmann, Beatrice, Steinheuer, Lisa Maria, Bruns, Tony, Rolle-Kampczyk, Ulrike, Hackermüller, Jörg and von Bergen, Martin), In Frontiers in immunology, Frontiers Media, volume 12, 2021, SFB 1382: Die Darm-Leber-Achse – Funktionelle Zusammenhänge und therapeutische Strategien (403224013). [bibtex] [url] [doi]
[8]	The gut bacterium Extibacter muris produces secondary bile acids and influences liver physiology in gnotobiotic mice (Streidl, Theresa, Karkossa, Isabel, Segura Muñoz, Rafael R., Eberl, Claudia, Zaufel, Alex, Plagge, Johannes, Schmaltz, Robert, Schubert, Kristin, Basic, Marijana, Schneider, Kai Markus, Afify, Mamdouh, Trautwein, Christian, Tolba, René H., Stecher, Bärbel, Doden, Heidi L., Ridlon, Jason M., Ecker, Josef, Moustafa, Tarek, von Bergen, Martin, Ramer-Tait, Amanda E. and Clavel, Thomas), In Gut microbes, Landes Bioscience, volume 13, 2021, SFB 1382: Die Darm-Leber-Achse – Funktionelle Zusammenhänge und therapeutische Strategien (403224013). [bibtex] [url] [doi]
2020
[7]	High microbiota reactivity of adult human intestinal IgA requires somatic mutations (Kabbert, Johanna, Benckert, Julia, Rollenske, Tim, Hitch, Thomas C. A., Clavel, Thomas, Cerovic, Vuk, Wardemann, Hedda and Pabst, Oliver), In Journal of experimental medicine, Rockefeller Univ. Press, volume 217, 2020, SFB 1382: Die Darm-Leber-Achse – Funktionelle Zusammenhänge und therapeutische Strategien (403224013). [bibtex] [url] [doi]
[6]	An Integrated Metagenome Catalog Reveals New Insights into the Murine Gut Microbiome (Lesker, Till R., Durairaj, Abilash C., Gálvez, Eric J. C., Lagkouvardos, Ilias, Baines, John F., Clavel, Thomas, Sczyrba, Alexander, McHardy, Alice C. and Strowig, Till), In Cell reports, Elsevier, volume 30, 2020, SFB 1382: Die Darm-Leber-Achse – Funktionelle Zusammenhänge und therapeutische Strategien (403224013). [bibtex] [url] [doi]
[5]	MAIT cell activation in adolescents is impacted by bile acid concentrations and body weight (Mendler, A., Pierzchalski, A., Bauer, M., Röder, S., Sattler, A., Standl, M., Borte, M., von Bergen, Martin, Rolle-Kampczyk, U. and Herberth, G.), In Clinical and experimental immunology, Wiley-Blackwell, volume 200, 2020, SFB 1382: Die Darm-Leber-Achse – Funktionelle Zusammenhänge und therapeutische Strategien (403224013). [bibtex] [url] [doi]
[4]	Rational design of a microbial consortium of mucosal sugar utilizers reduces Clostridiodes difficile colonization (Pereira, Fátima C., Wasmund, Kenneth, Cobankovic, Iva, Jehmlich, Nico, Herbold, Craig W., Lee, Kang Soo, Sziranyi, Barbara, Vesely, Cornelia, Decker, Thomas, Stocker, Roman, Warth, Benedikt, von Bergen, Martin, Wagner, Michael and Berry, David), In Nature Communications, Nature Publishing Group UK, volume 11, 2020, SFB 1382: Die Darm-Leber-Achse – Funktionelle Zusammenhänge und therapeutische Strategien (403224013). [bibtex] [url] [doi]
[3]	Disturbed gut microbiota and bile homeostasis in Giardia-infected mice contributes to metabolic dysregulation and growth impairment (Riba, Ambre, Hassani, Kasra, Walker, Alesia, van Best, Niels, von Zeschwitz, Dunja, Anslinger, Teresa, Sillner, Nina, Rosenhain, Stefanie, Eibach, Daniel, Maiga-Ascofaré, Oumou, Rolle-Kampczyk, Ulrike, Basic, Marijana, Binz, Anne, Mocek, Sabine, Sodeik, Beate, Bauerfeind, Rudolf, Mohs, Antje, Trautwein, Christian, Kießling, Fabian, May, Jürgen, Klingenspor, Martin, Gremse, Felix, Schmitt-Kopplin, Philippe, Bleich, André, Torow, Natalia, von Bergen, Martin and Hornef, Mathias W.), In Science translational medicine, AAAS, volume 12, 2020, SFB 1382: Die Darm-Leber-Achse – Funktionelle Zusammenhänge und therapeutische Strategien (403224013). [bibtex] [url] [doi]
[2]	Bile acids drive the newborn’s gut microbiota maturation (van Best, Niels, Rolle-Kampczyk, U., Schaap, Frank G., Basic, M., Olde Damink, Steven W. M., Bleich, A., Savelkoul, P., von Bergen, Martin, Penders, J. and Hornef, Mathias W.), In Nature Communications, Nature Publishing Group UK, volume 11, 2020, SFB 1382: Die Darm-Leber-Achse – Funktionelle Zusammenhänge und therapeutische Strategien (403224013). [bibtex] [url] [doi]
2019
[1]	The Compromised Mucosal Immune System of β7 Integrin-Deficient Mice Has Only Minor Effects on the Fecal Microbiota in Homeostasis (Babbar, Anshu, Hitch, Thomas C. A., Pabst, Oliver, Clavel, Thomas, Hübel, Jessica, Eswaran, Sreepradha, Wagner, Norbert and Schippers, Angela), In Frontiers in microbiology, Frontiers Media, volume 10, 2019, SFB 1382: Die Darm-Leber-Achse – Funktionelle Zusammenhänge und therapeutische Strategien (403224013). [bibtex] [url] [doi]